Bacterial Computing Device!

by Gopalan on  October 26, 2011 at 7:05 AM News on IT in Healthcare   - G J E 4
Digital devices out of bacteria and DNA? Yes, it looks like a distinct possibility now. British scientists have successfully demonstrated that the logic gates used for processing information can be built of harmless gut bacteria and DNA.
 Bacterial Computing Device!
Bacterial Computing Device!

Although still a long way off, the London Imperial College team suggests that these biological logic gates could one day form the building blocks in microscopic biological computers. Devices may include sensors that swim inside arteries, detecting the build-up of harmful plaque and rapidly delivering medications to the affected zone. Other applications may include sensors that detect and destroy cancer cells inside the body and pollution monitors that can be deployed in the environment, detecting and neutralising dangerous toxins such as arsenic.

The research is published in the journal Nature Communications.

Professor Richard Kitney, co-author of the paper from the Centre for Synthetic Biology and Innovation and the Department of Bioengineering at Imperial College London, says:

"Logic gates are the fundamental building blocks in silicon circuitry that our entire digital age is based on. Without them, we could not process digital information. Now that we have demonstrated that we can replicate these parts using bacteria and DNA, we hope that our work could lead to a new generation of biological processors, whose applications in information processing could be as important as their electronic equivalents."

The team says that the advantage of their biological logic gates over previous attempts is that they behave like their electronic counterparts. Previous research only proved that biological gates could be made. The new biological gates are also modular, which means that they can be fitted together to make different types of logic gates, paving the way for more complex biological processors to be built in the future.

In the new study, the researchers demonstrated how these biological logic gates worked. In one experiment, they showed how biological logic gates can replicate the way that electronic logic gates process information by either switching "on" or "off".

The scientists constructed a type of logic gate called an "AND Gate" from bacteria called Escherichia coli (E.Coli), which is normally found in the lower intestine. The team altered the E.Coli with modified DNA, which reprogrammed it to perform the same switching on and off process as its electronic equivalent when stimulated by chemicals.

The researchers were also able to demonstrate that the biological logic gates could be connected together to form more complex components in a similar way that electronic components are made. In another experiment, the researchers created a "NOT gate" and combined it with the AND gate to produce the more complex "NAND gate".

The next stage of the research will see the team trying to develop more complex circuitry that comprises multiple logic gates. One of challenges faced by the team is finding a way to link multiple biological logic gates together similar to the way in which electronic logic gates are linked together to enable complex processing to be carried out.

Professor Martin Buck, co-author of the paper from the Department of Life Sciences at Imperial College London, adds: "We believe that the next stage of our research could lead to a totally new type of circuitry for processing information. In the future, we may see complex biological circuitry processing information using chemicals, much in the same way that our body uses them to process and store information."

Professor Paul Freemont, Co-director for the Centre for Synthetic Biology and Innovation at Imperial College London, adds: "Even though this research is still in its early stages, it is already showing how collaborations between disciplines can bear fruit. I look forward to the next stage of this research, which could take information processing to a whole new 'biological' level."

Source: Medindia

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