Scientists have created the first high-resolution gene expression map of the newborn mouse inner ear using a sensitive new technology.
The findings provide new insight into how hair cells and supporting cells in the inner ear develop and differentiate into specialized cells that serve critical functions for hearing and maintaining balance.
Understanding how these important cells form may provide a foundation for the potential development of cell-based therapies for treating hearing loss and balance disorders.
Hair cells and supporting cells can be damaged by medications, infections or disease, injury and aging, leading to hearing loss and balance problems.
In humans, these cells cannot naturally repair themselves, so effective treatments are limited.
To gain a better understanding of inner ear cell development, the team used single-cell RNA-seq - a new technology that can extract comprehensive gene activity data from just one cell.
The team analyzed 301 cells - some hair cells and some supporting cells - taken from the cochlea and utricle of newborn mice.
By comparing the cells' gene activity profiles, the researchers found unique patterns in hair cells and supporting cells.
The data also allowed the scientists to identify distinct developmental patterns of gene activity.
By analyzing the cells' gene activity profiles, the scientists were able to identify genes that are active at each stage of development, bringing to light important clues about how the specialized hair cells are formed.
"Using this single-cell profiling technique provides a new option to identify the genetic activity of cells, particularly in systems with limited numbers of cells, like the inner ear," noted Matthew Kelley, senior study author from NIDCD.
Identifying the gene expression maps for the development of inner ear cells is essential to understanding how they form, and may help scientists create ways to regenerate these cells.
The paper appeared in the journal Nature Communications.