Many of the Assam Rifles troops are posted in north-eastern India and are engaged in fighting local insurgencies.
While India has one of the highest numbers of people with HIV in the world, the embattled northeast is considered a HIV hotspot and a drug den too.
Lt Gen Yadava said the force is organising sex education lessons for troops.
"We have asked our men to fight back the menace (of HIV infections) with full strength," he said.
The Assam Rifles are recruited and deployed in the north-east of India - where they help maintain security or quell insurgencies in states such Manipur, Mizoram and Nagaland.
They are posted in areas close to the Burmese border which have some of the highest rates of HIV infection in India.
Analysts say the easy availability of narcotics from Burma - and the local tendency to inject them through the multiple use of syringes - is the main cause for such high prevalence of Aids.
But they say members of the Assam Rifles mainly get infected through unprotected sex rather than through drugs use.
Assam Rifles troops have, in recent years, been accused of forcing local women into having sex with them.
In 1987, the force launched Operation Bluebird in the Oinam area of Manipur after Naga separatists looted more than 100 weapons from their camp.
Human rights groups in the north-east allege that at that time, a large number of rapes were reported and some pregnant women were even forced to give birth in the open.
In 1989, an Assam Rifles patrol was found guilty of gang-raping a number of tribal women in a remote hamlet in the state of Tripura.
In 2004, they were accused of raping and killing a girl in Manipur.
The US-based Human Rights Watch said in a recent report that some of the guilty troops were being shielded, though the case is still going on, Subir Bhaumik reports for BBC.
The Assam Rifles was raised 173 years ago as a specialist force by the British during their campaigns against fiercely-independent tribal chiefs in the north-east.
Post-colonial India expanded the force to its current strength of 46 battalions - with about 1,000 men in each battalion - as rebel groups proliferated across the troubled north-east.